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USC-OGP 2-DE database

Two-dimensional polyacrylamide gel electrophoresis database


USC-OGP 2-DE database 
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Searching in 'USC-OGP 2-DE database' for entry matching: P0C0S5




USC-OGP 2-DE database:  P0C0S5


P0C0S5


General information about the entry
View entry in simple text format
Entry nameH2AZ_HUMAN
Primary accession numberP0C0S5
Secondary accession number(s) P17317
integrated into USC-OGP 2-DE database on January 17, 2017 (release 1)
2D Annotations were last modified onJanuary 17, 2017 (version 1)
General Annotations were last modified on April 5, 2017 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Histone H2A.Z; Short=H2A/z;.
Gene nameName=H2AFZ
Synonyms=H2AZ
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   2D GEL CHARACTERIZATION
Author 1., Author 2.
Submitted (Mar-2011) to Current
2D PAGE maps for identified proteins
How to interpret a protein

UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10}
Homo sapiens (Human)
UVEAL_MELANOMA_3-10
  map experimental info
 
UVEAL_MELANOMA_3-10

MAP LOCATIONS:
pI=5.13; Mw=15865
pI=5.68; Mw=15649

Cross-references
UniProtKB/Swiss-ProtP0C0S5; H2AZ_HUMAN.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 0.0
Entry nameH2AZ_HUMAN
Primary accession numberP0C0S5
Secondary accession number(s) B2RD56 P17317 Q6I9U0
Sequence was last modified on January 23, 2007 (version 2)
Annotations were last modified on March 15, 2017 (version 122)
Name and origin of the protein
DescriptionRecName: Full=Histone H2A.Z; Short=H2A/z;
Gene nameName=H2AFZ
Synonyms=H2AZ
Encoded onName=H2AFZ; Synonyms=H2AZ
Keywords3D-structure; Acetylation; Chromosome; Complete proteome; DNA-binding; Isopeptide bond; Methylation; Nucleosome core; Nucleus; Reference proteome; Ubl conjugation.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLX52317; CAA36553.1; -; mRNA
EMBLM37583; AAA35984.1; -; mRNA
EMBLL10138; AAC61625.1; -; Genomic_DNA
EMBLCR457415; CAG33696.1; -; mRNA
EMBLAK315413; BAG37803.1; -; mRNA
EMBLAC097460; AAY41013.1; -; Genomic_DNA
EMBLCH471057; EAX06118.1; -; Genomic_DNA
EMBLBC018002; AAH18002.1; -; mRNA
EMBLBC020936; AAH20936.1; -; mRNA
EMBLBC103743; AAI03744.1; -; mRNA
CCDSCCDS3654.1; -; .
PIRA35881; A35881; .
RefSeqNP_002097.1; NM_002106.3; .
UniGeneHs.119192; -; .
PDB1F66; X-ray; 2.60 A; C/G=1-128
PDB3WA9; X-ray; 3.07 A; C/G=1-128
PDB4CAY; X-ray; 1.48 A; A=19-128
PDB4NFT; X-ray; 2.61 A; A/B/C/D=16-114
PDB5B31; X-ray; 2.20 A; G=1-128
PDB5B32; X-ray; 2.35 A; G=1-128
PDB5B33; X-ray; 2.92 A; C/G=1-128
PDB5CHL; X-ray; 1.89 A; B=22-113
PDB5FUG; X-ray; 2.70 A; A/D/G/J=19-128
PDBsum1F66; -; .
PDBsum3WA9; -; .
PDBsum4CAY; -; .
PDBsum4NFT; -; .
PDBsum5B31; -; .
PDBsum5B32; -; .
PDBsum5B33; -; .
PDBsum5CHL; -; .
PDBsum5FUG; -; .
ProteinModelPortalP0C0S5; -; .
SMRP0C0S5; -; .
BioGrid109269; 62; .
DIPDIP-38593N; -; .
IntActP0C0S5; 4; .
MINTMINT-1605675; -; .
STRING9606.ENSP00000296417; -; .
iPTMnetP0C0S5; -; .
PhosphoSitePlusP0C0S5; -; .
SwissPalmP0C0S5; -; .
BioMutaH2AFZ; -; .
DMDM83288408; -; .
EPDP0C0S5; -; .
MaxQBP0C0S5; -; .
PaxDbP0C0S5; -; .
PeptideAtlasP0C0S5; -; .
PRIDEP0C0S5; -; .
TopDownProteomicsP0C0S5; -; .
DNASU3015; -; .
EnsemblENST00000296417; ENSP00000296417; ENSG00000164032; .
GeneID3015; -; .
KEGGhsa:3015; -; .
UCSCuc003hvo.2; human; .
CTD3015; -; .
DisGeNET3015; -; .
GeneCardsH2AFZ; -; .
HGNCHGNC:4741; H2AFZ; .
HPACAB022549; -; .
HPAHPA057236; -; .
MIM142763; gene; .
neXtProtNX_P0C0S5; -; .
OpenTargetsENSG00000164032; -; .
PharmGKBPA29119; -; .
eggNOGKOG1757; Eukaryota; .
eggNOGCOG5262; LUCA; .
GeneTreeENSGT00710000106735; -; .
HOGENOMHOG000234652; -; .
HOVERGENHBG009342; -; .
InParanoidP0C0S5; -; .
KOK11251; -; .
OMALRNKNAN; -; .
OrthoDBEOG091G0XGD; -; .
PhylomeDBP0C0S5; -; .
TreeFamTF354232; -; .
ReactomeR-HSA-1221632; Meiotic synapsis; .
ReactomeR-HSA-171306; Packaging Of Telomere Ends; .
ReactomeR-HSA-201722; Formation of the beta-catenin:TCF transactivating complex; .
ReactomeR-HSA-212300; PRC2 methylates histones and DNA; .
ReactomeR-HSA-2299718; Condensation of Prophase Chromosomes; .
ReactomeR-HSA-2559580; Oxidative Stress Induced Senescence; .
ReactomeR-HSA-2559582; Senescence-Associated Secretory Phenotype (SASP); .
ReactomeR-HSA-2559586; DNA Damage/Telomere Stress Induced Senescence; .
ReactomeR-HSA-3214858; RMTs methylate histone arginines; .
ReactomeR-HSA-427359; SIRT1 negatively regulates rRNA Expression; .
ReactomeR-HSA-427389; ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression; .
ReactomeR-HSA-427413; NoRC negatively regulates rRNA expression; .
ReactomeR-HSA-5250924; B-WICH complex positively regulates rRNA expression; .
ReactomeR-HSA-5334118; DNA methylation; .
ReactomeR-HSA-5578749; Transcriptional regulation by small RNAs; .
ReactomeR-HSA-5617472; Activation of anterior HOX genes in hindbrain development during early embryogenesis; .
ReactomeR-HSA-5625886; Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3; .
ReactomeR-HSA-606279; Deposition of new CENPA-containing nucleosomes at the centromere; .
ReactomeR-HSA-73728; RNA Polymerase I Promoter Opening; .
ReactomeR-HSA-73777; RNA Polymerase I Chain Elongation; .
ReactomeR-HSA-912446; Meiotic recombination; .
ReactomeR-HSA-977225; Amyloid fiber formation; .
SIGNORP0C0S5; -; .
ChiTaRSH2AFZ; human; .
EvolutionaryTraceP0C0S5; -; .
GeneWikiH2AFZ; -; .
GenomeRNAi3015; -; .
PMAP-CutDBP0C0S5; -; .
PROPR:P0C0S5; -; .
ProteomesUP000005640; Chromosome 4; .
BgeeENSG00000164032; -; .
CleanExHS_H2AFZ; -; .
GenevisibleP0C0S5; HS; .
GOGO:0070062; C:extracellular exosome; IDA:UniProtKB; .
GOGO:0005719; C:nuclear euchromatin; IDA:UniProtKB; .
GOGO:0005720; C:nuclear heterochromatin; IDA:UniProtKB; .
GOGO:0000786; C:nucleosome; IEA:UniProtKB-KW; .
GOGO:0005634; C:nucleus; IDA:UniProtKB; .
GOGO:0031490; F:chromatin DNA binding; IDA:UniProtKB; .
GOGO:0031492; F:nucleosomal DNA binding; IDA:UniProtKB; .
GOGO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; IDA:UniProtKB; .
GOGO:0000979; F:RNA polymerase II core promoter sequence-specific DNA binding; IDA:UniProtKB; .
GOGO:0000980; F:RNA polymerase II distal enhancer sequence-specific DNA binding; IDA:UniProtKB; .
GOGO:0071392; P:cellular response to estradiol stimulus; IMP:UniProtKB; .
GOGO:0006342; P:chromatin silencing; IBA:GO_Central; .
GOGO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB; .
Gene3D1.10.20.10; -; 1; .
InterProIPR009072; Histone-fold; .
InterProIPR002119; Histone_H2A; .
InterProIPR007125; Histone_H2A/H2B/H3; .
InterProIPR032454; Histone_H2A_C; .
InterProIPR032458; Histone_H2A_CS; .
PfamPF00125; Histone; 1; .
PfamPF16211; Histone_H2A_C; 1; .
PRINTSPR00620; HISTONEH2A; .
SMARTSM00414; H2A; 1; .
SUPFAMSSF47113; SSF47113; 1; .
PROSITEPS00046; HISTONE_H2A; 1; .



USC-OGP 2-DE database image


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Database constructed and maintained by Angel Garcia, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server

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